BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB036C03SP1|AL430193
(918 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1503 1739 0.0
3x_Contig1624 211 2e-54
3x_Contig1263 209 9e-54
3x_Contig869 205 1e-52
3x_Contig1722 195 2e-49
>3x_Contig1503
Length = 10719
Score = 1739 bits (866), Expect = 0.0
Identities = 897/918 (97%), Gaps = 1/918 (0%)
Strand = Plus / Minus
Query: 1 ccacatactaactaacttaatatttagctattcacgggccttgtatgaatttctgtccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3847 ccacatactaactaacttaatatttagctattcacgggccttgtatgaatttctgtccag 3788
Query: 61 aaaaacagtgtttttcacgcaacaactgtcggtatagacacctgcgataccatcgaacgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3787 aaaaacagtgtttttcacgcaacaactgtcggtatagacacctgcgataccatcgaacgg 3728
Query: 121 tactagctgttcgtagtttcccaccgcttgattgcrttgcattgcattgcattctacctt 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 3727 tactagctgttcgtagtttcccaccgcttgattgcattgcattgcattgcattctacctt 3668
Query: 181 ttcctaattctttcttccccatgcgacttgtacttcctaatgtaactctccgtagtatgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3667 ttcctaattctttcttccccatgcgacttgtacttcctaatgtaactctccgtagtatgc 3608
Query: 241 caaaagccaagtaactcctctcggtagccaagttggtttaaggsgccagactgtratttg 300
||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct: 3607 caaaagccaagtaactcctctcggtagccaagttggtttaaggcgccagactgtaatttg 3548
Query: 301 aaaacacaaagcaatttgtaatctggrgakcgggcgtkcgactcgcccccgggagactta 360
|||||||||||||||||||||||||| || ||||||| ||||||||||||||||||||||
Sbjct: 3547 aaaacacaaagcaatttgtaatctggagatcgggcgttcgactcgcccccgggagactta 3488
Query: 361 tttttttttttgaatcttctatgccacaaagagaaagaragaraggscacacacacagcc 420
|||||||||||||||||||||||||||||||||||||| ||| ||| |||||||||||||
Sbjct: 3487 tttttttttttgaatcttctatgccacaaagagaaagaaagaaaggccacacacacagcc 3428
Query: 421 ttcactgtggrcggkatcggstgcraaaccagcctttccacgaracgggraarttatgtc 480
|||||||||| ||| ||||| ||| |||||||||||||||||| ||||| || |||||||
Sbjct: 3427 ttcactgtggacggtatcggctgcaaaaccagcctttccacgaaacgggaaaattatgtc 3368
Query: 481 ttttccctaagcagtatgatcgaccacaagtactatccatatcatggcagaggcatatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 3367 ttttccctaagcagtatgatcgaccacaagtactatccatatcatggcagatgcatatat 3308
Query: 541 gtggkttatatggcaaagctgatatatatttgtgcgatagacacagatggctttctttga 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3307 gtggtttatatggcaaagctgatatatatttgtgcgatagacacagatggctttctttga 3248
Query: 601 gtgtgtgatttacttgtatagtttctccgtragtgtcctacggagcttgttgacacaata 660
|||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 3247 gtgtgtaatttacttgtatagtttctccgtaagtgt-ctacggagcttgttgacacaata 3189
Query: 661 tagcaacatagggtggatcaatcgactgttttctgtcgttatctttctgcagcctttatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3188 tagcaacatagggtggatcaatcgactgttttctgtcgttatctttctgcagcctttatc 3129
Query: 721 gcattttttttcttttgttcaagatttagatttcgactcgaaatctccatttactattaa 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3128 gcattttttttcttttgttcaagatttagatttcgactcgaaatctccatttactattaa 3069
Query: 781 aagaagtcttcttcaagcaacactcgctggtttgtttaaagacagagactggttaaagac 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3068 aagaagtcttcttcaagcaacactcgctggtttgtttaaagacagagactggttaaagac 3009
Query: 841 gcgtttcattcgagaagttagccgaatcttgttgccttttgcactctaattacaattaaa 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3008 gcgtttcattcgagaagttagccgaatcttgttgccttttgcactctaattacaattaaa 2949
Query: 901 attggaatcattgtcaaa 918
||||||||||||||||||
Sbjct: 2948 attggaatcattgtcaaa 2931
>3x_Contig1624
Length = 12551
Score = 211 bits (105), Expect = 2e-54
Identities = 113/119 (94%)
Strand = Plus / Minus
Query: 248 caagtaactcctctcggtagccaagttggtttaaggsgccagactgtratttgaaaacac 307
|||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 6102 caagtaactcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacac 6043
Query: 308 aaagcaatttgtaatctggrgakcgggcgtkcgactcgcccccgggagacttatttttt 366
||||||||||||||||||| || ||||||| ||||||||||||||||||||| ||||||
Sbjct: 6042 aaagcaatttgtaatctggagatcgggcgttcgactcgcccccgggagacttttttttt 5984
>3x_Contig1263
Length = 6840
Score = 209 bits (104), Expect = 9e-54
Identities = 115/122 (94%)
Strand = Plus / Plus
Query: 248 caagtaactcctctcggtagccaagttggtttaaggsgccagactgtratttgaaaacac 307
||||||||| |||||||||||||||||||||||||| |||||||||| ||||||||||||
Sbjct: 5468 caagtaacttctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacac 5527
Query: 308 aaagcaatttgtaatctggrgakcgggcgtkcgactcgcccccgggagacttattttttt 367
||||||||||||||||||| || ||||||| ||||||||||||||||||||||| |||||
Sbjct: 5528 aaagcaatttgtaatctggagatcgggcgttcgactcgcccccgggagacttatcttttt 5587
Query: 368 tt 369
||
Sbjct: 5588 tt 5589
>3x_Contig869
Length = 2873
Score = 205 bits (102), Expect = 1e-52
Identities = 110/116 (94%)
Strand = Plus / Plus
Query: 256 tcctctcggtagccaagttggtttaaggsgccagactgtratttgaaaacacaaagcaat 315
|||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 1861 tcctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaat 1920
Query: 316 ttgtaatctggrgakcgggcgtkcgactcgcccccgggagacttattttttttttt 371
||||||||||| || ||||||| ||||||||||||||||||||||| |||||||||
Sbjct: 1921 ttgtaatctggagatcgggcgttcgactcgcccccgggagacttatcttttttttt 1976
>3x_Contig1722
Length = 17718
Score = 195 bits (97), Expect = 2e-49
Identities = 108/115 (93%)
Strand = Plus / Minus
Query: 257 cctctcggtagccaagttggtttaaggsgccagactgtratttgaaaacacaaagcaatt 316
||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||
Sbjct: 5777 cctctcggtagccaagttggtttaaggcgccagactgtaatttgaaaacacaaagcaatt 5718
Query: 317 tgtaatctggrgakcgggcgtkcgactcgcccccgggagacttattttttttttt 371
|||||||||| || ||||||| ||||||||||||||||||||| ||||| |||||
Sbjct: 5717 tgtaatctggagatcgggcgttcgactcgcccccgggagacttctttttgttttt 5663
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.713 1.32
Gapped
Lambda K H
1.39 0.713 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 11,357
Number of Sequences: 1807
Number of extensions: 11357
Number of successful extensions: 72
Number of sequences better than 1.0e-20: 5
length of query: 918
length of database: 10,358,551
effective HSP length: 16
effective length of query: 902
effective length of database: 10,329,639
effective search space: 9317334378
effective search space used: 9317334378
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.1 bits)
S1: 12 (24.6 bits)
S2: 50 (100.9 bits)